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Публикации за 2011

Chaperonin TRiC assists the refolding of sperm-specific glyceraldehyde-3-phosphate dehydrogenase.
Naletova, I. N.; Popova, K. M.; Eldarov, M. A.; Kuravsky, M. L.; Schmalhausen, E. V.; Sevostyanova, I. A.; Muronetz, V. I.
Arch Biochem Biophys. 2011 Dec 1;516(1):75-83. Epub 2011 Oct 3.
PubMed; doi 10.1016/j.abb.2011.09.010

Chaperonins induce an amyloid-like transformation of ovine prion protein: The fundamental difference in action between eukaryotic TRiC and bacterial GroEL.
Kiselev, G. G.; Naletova, I. N.; Sheval, E. V.; Stroylova, Y. Y.; Schmalhausen, E. V.; Haertle, T.; Muronetz, V. I.
Biochim Biophys Acta. 2011 Dec;1814(12):1730-8. Epub 2011 Aug 16.
PubMed; doi 10.1016/j.bbapap.2011.08.006

Design and validation of consensus-degenerate hybrid oligonucleotide primers for broad and sensitive detection of corona- and toroviruses.
Zlateva, K. T.; Crusio, K. M.; Leontovich, A. M.; Lauber, C.; Claas, E.; Kravchenko, A. A.; Spaan, W. J.; Gorbalenya, A. E.
J Virol Methods. 2011 Nov;177(2):174-83. Epub 2011 Aug 11.
PubMed; doi 10.1016/j.jviromet.2011.08.005

Novel mitochondria-targeted antioxidants: plastoquinone conjugated with cationic plant alkaloids berberine and palmatine.
Lyamzaev, K. G.; Pustovidko, A. V.; Simonyan, R. A.; Rokitskaya, T. I.; Domnina, L. V.; Ivanova, O. Y.; Severina, I. I.; Sumbatyan, N. V.; Korshunova, G. A.; Tashlitsky, V. N.; Roginsky, V. A.; Antonenko, Y. N.; Skulachev, M. V.; Chernyak, B. V.; Skulachev, V. P.
Pharm Res. 2011 Nov;28(11):2883-95. Epub 2011 Jun 14.
PubMed; doi 10.1007/s11095-011-0504-8

Novel mechanism of Hsp70 chaperone-mediated prevention of polyglutamine aggregates in a cellular model of huntington disease.
Guzhova, I. V.; Lazarev, V. F.; Kaznacheeva, A. V.; Ippolitova, M. V.; Muronetz, V. I.; Kinev, A. V.; Margulis, B. A.
Hum Mol Genet. 2011 Oct 15;20(20):3953-63. Epub 2011 Jul 20.
PubMed; doi 10.1093/hmg/ddr314

Mitochondria-Targeted Antioxidants as Promising Drugs for Treatment of Age-Related Brain Diseases.
Skulachev, V. P.
J Alzheimers Dis. 2011 Oct 10.
PubMed; doi 10.3233/JAD-2011-111391

Sequencing and analysis of plastid genome in mycoheterotrophic orchid Neottia nidus-avis.
Logacheva, M. D.; Schelkunov, M. I.; Penin, A. A.
Genome Biol Evol. 2011 Oct 4.
PubMed; doi 10.1093/gbe/evr102

Aggregation and structural changes of alpha(S1)-, beta- and kappa-caseins induced by homocysteinylation.
Stroylova, Y. Y.; Zimny, J.; Yousefi, R.; Chobert, J. M.; Jakubowski, H.; Muronetz, V. I.; Haertle, T.
Biochim Biophys Acta. 2011 Oct;1814(10):1234-45. Epub 2011 Jun 12.
PubMed; doi 10.1016/j.bbapap.2011.05.017

Sequence-structure relationships in yeast mRNAs.
Chursov, A.; Walter, M. C.; Schmidt, T.; Mironov, A.; Shneider, A.; Frishman, D.
Nucleic Acids Res. 2011 Sep 27.
PubMed; doi 10.1093/nar/gkr790

Cation binding to 15-TBA quadruplex DNA is a multiple-pathway cation-dependent process.
Reshetnikov, R. V.; Sponer, J.; Rassokhina, O. I.; Kopylov, A. M.; Tsvetkov, P. O.; Makarov, A. A.; Golovin, A. V.
Nucleic Acids Res. 2011 Sep 5.
PubMed; doi 10.1093/nar/gkr639

Selective permeabilization of lipid membranes by photodynamic action via formation of hydrophobic defects or pre-pores.
Kotova, E. A.; Kuzevanov, A. V.; Pashkovskaya, A. A.; Antonenko, Y. N.
Biochim Biophys Acta. 2011 Sep;1808(9):2252-7. Epub 2011 Jun 1.
PubMed; doi 10.1016/j.bbamem.2011.05.018

Complete genome and proteome of Acholeplasma laidlawii.
Lazarev, V. N.; Levitskii, S. A.; Basovskii, Y. I.; Chukin, M. M.; Akopian, T. A.; Vereshchagin, V. V.; Kostrjukova, E. S.; Kovaleva, G. Y.; Kazanov, M. D.; Malko, D. B.; Vitreschak, A. G.; Sernova, N. V.; Gelfand, M. S.; Demina, I. A.; Serebryakova, M. V.; Galyamina, M. A.; Vtyurin, N. N.; Rogov, S. I.; Alexeev, D. G.; Ladygina, V. G.; Govorun, V. M.
J Bacteriol. 2011 Sep;193(18):4943-53. Epub 2011 Jul 22.
PubMed; doi 10.1128/JB.05059-11

Role of glutamine in neuronal survival and death during brain ischemia and hypoglycemia.
Stelmashook, E. V.; Isaev, N. K.; Lozier, E. R.; Goryacheva, E. S.; Khaspekov, L. G.
Int J Neurosci. 2011 Aug;121(8):415-22. Epub 2011 May 17.
PubMed; doi 10.3109/00207454.2011.570464

Comparative genomic analysis of the hexuronate metabolism genes and their regulation in gammaproteobacteria.
Suvorova, I. A.; Tutukina, M. N.; Ravcheev, D. A.; Rodionov, D. A.; Ozoline, O. N.; Gelfand, M. S.
J Bacteriol. 2011 Aug;193(15):3956-63. Epub 2011 May 27.
PubMed; doi 10.1128/JB.00277-11

Correlation between number and position of floral organs in Arabidopsis.
Penin, A. A.; Logacheva, M. D.
Ann Bot. 2011 Jul;108(1):123-31.
PubMed; doi 10.1093/aob/mcr115

Linker and/or transmembrane regions of influenza A/Group-1, A/Group-2, and type B virus hemagglutinins are packed differently within trimers.
Kordyukova, L. V.; Serebryakova, M. V.; Polyansky, A. A.; Kropotkina, E. A.; Alexeevski, A. V.; Veit, M.; Efremov, R. G.; Filippova, I. Y.; Baratova, L. A.
Biochim Biophys Acta. 2011 Jul;1808(7):1843-54. Epub 2011 Mar 21.
PubMed; doi 10.1016/j.bbamem.2011.03.005

Comparative genomics of the dormancy regulons in mycobacteria.
Gerasimova, A.; Kazakov, A. E.; Arkin, A. P.; Dubchak, I.; Gelfand, M. S.
J Bacteriol. 2011 Jul;193(14):3446-52. Epub 2011 May 20.
PubMed; doi 10.1128/JB.00179-11

[Machine learning study of DNA binding by transcription factors from the LacI family].
Fedonin, G. G.; Rakhmaninova, A. B.; Korostelev, I. u. D.; Laikova, O. N.; Gel'fand, M. S.
Mol Biol (Mosk). 2011 Jul-Aug;45(4):724-37.
PubMed

[Regulation of multidrug resistance genes by transcriptional factors from the BltR subfamily].
Zharov, I. A.; Gel'fand, M. S.; Kazakov, A. E.
Mol Biol (Mosk). 2011 Jul-Aug;45(4):715-23.
PubMed

[Prothymosin alpha interacts with C-terminal domain of histone H1 and dissociates p53-histone H1 complex].
Zakharova, N. I.; Sokolov, V. V.; Suvorova, A. A.; Shiau, A. I.; Wu, C. L.; Efstaf'eva, A. G.
Mol Biol (Mosk). 2011 Jul-Aug;45(4):679-88.
PubMed

Crosslinking of (cytosine-5)-DNA methyltransferase SsoII and its complexes with specific DNA duplexes provides an insight into their structures.
Ryazanova, A. Y.; Winkler, I.; Friedhoff, P.; Viryasov, M. B.; Oretskaya, T. S.; Kubareva, E. A.
Nucleosides Nucleotides Nucleic Acids. 2011 Jul-Aug;30(7-8):632-50.
PubMed; doi 10.1080/15257770.2011.584339

New words in human mutagenesis.
Panchin, A. Y.; Mitrofanov, S. I.; Alexeevski, A. V.; Spirin, S. A.; Panchin, Y. V.
BMC Bioinformatics. 2011 Jun 30;12:268.
PubMed; doi 10.1186/1471-2105-12-268

Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus.
Rodionov, D. A.; Novichkov, P. S.; Stavrovskaya, E. D.; Rodionova, I. A.; Li, X.; Kazanov, M. D.; Ravcheev, D. A.; Gerasimova, A. V.; Kazakov, A. E.; Kovaleva, G. Y.; Permina, E. A.; Laikova, O. N.; Overbeek, R.; Romine, M. F.; Fredrickson, J. K.; Arkin, A. P.; Dubchak, I.; Osterman, A. L.; Gelfand, M. S.
BMC Genomics. 2011 Jun 15;12 Suppl 1:S3.
PubMed; doi 10.1186/1471-2164-12-S1-S3

Testis-specific glyceraldehyde-3-phosphate dehydrogenase: origin and evolution.
Kuravsky, M. L.; Aleshin, V. V.; Frishman, D.; Muronetz, V. I.
BMC Evol Biol. 2011 Jun 10;11:160.
PubMed; doi 10.1186/1471-2148-11-160

Mitochondrial-targeted plastoquinone derivatives. Effect on senescence and acute age-related pathologies.
Skulachev, M. V.; Antonenko, Y. N.; Anisimov, V. N.; Chernyak, B. V.; Cherepanov, D. A.; Chistyakov, V. A.; Egorov, M. V.; Kolosova, N. G.; Korshunova, G. A.; Lyamzaev, K. G.; Plotnikov, E. Y.; Roginsky, V. A.; Savchenko, A. Y.; Severina, I. I.; Severin, F. F.; Shkurat, T. P.; Tashlitsky, V. N.; Shidlovsky, K. M.; Vyssokikh, M. Y.; Zamyatnin, A. A.; Zorov, D. B.; Skulachev, V. P.
Curr Drug Targets. 2011 Jun;12(6):800-26.
PubMed

Poly(ADP-ribosyl)ation of mannose-binding lectin out of human kidney cells.
Sidorova, N. N.; Kurchashova, S. Y.; Yarahmedov, T. Y.; Ziganshin, R. H.; Kuimov, A. N.
Mol Cell Biochem. 2011 Jun;352(1-2):231-8. Epub 2011 Mar 6.
PubMed; doi 10.1007/s11010-011-0758-9

Derivatives of rhodamine 19 as mild mitochondria-targeted cationic uncouplers.
Antonenko, Y. N.; Avetisyan, A. V.; Cherepanov, D. A.; Knorre, D. A.; Korshunova, G. A.; Markova, O. V.; Ojovan, S. M.; Perevoshchikova, I. V.; Pustovidko, A. V.; Rokitskaya, T. I.; Severina, I. I.; Simonyan, R. A.; Smirnova, E. A.; Sobko, A. A.; Sumbatyan, N. V.; Severin, F. F.; Skulachev, V. P.
J Biol Chem. 2011 May 20;286(20):17831-40. Epub 2011 Mar 30.
PubMed; doi 10.1074/jbc.M110.212837

Selection and validation of reference genes for quantitative real-time PCR in buckwheat (Fagopyrum esculentum) based on transcriptome sequence data.
Demidenko, N. V.; Logacheva, M. D.; Penin, A. A.
PLoS One. 2011 May 12;6(5):e19434.
PubMed; doi 10.1371/journal.pone.0019434

[Improved procedure of the search for poly(ADP-ribose) polymerase-1 potential inhibitors with use of molecular docking approach].
Zakharenko, A. L.; Sukhanova, M. V.; Khodyreva, S. N.; Novikov, F. N.; Stroilov, V. S.; Nilov, D. K.; Chilov, G. G.; Shviadas, V. K.; Lavrik, O. I.
Mol Biol (Mosk). 2011 May-Jun;45(3):565-9.
PubMed

On the relationship between the load and the variance of relative fitness.
Shnol, E. E.; Ermakova, E. A.; Kondrashov, A. S.
Biol Direct. 2011 Apr 14;6:20.
PubMed; doi 10.1186/1745-6150-6-20

Quasi-equilibrium assumption for arbitrary mechanism of enzymatic reaction. Criteria for existence of equilibrium segments.
Vrzheshch, P. V.
Biochemistry (Mosc). 2011 Apr;76(4):491-2.
PubMed

Accumulation of dodecyltriphenylphosphonium in mitochondria induces their swelling and ROS-dependent growth inhibition in yeast.
Ojovan, S. M.; Knorre, D. A.; Markova, O. V.; Smirnova, E. A.; Bakeeva, L. E.; Severin, F. F.
J Bioenerg Biomembr. 2011 Apr;43(2):175-80. doi: 10.1007/s10863-011-9345-8. Epub
PubMed; doi 10.1007/s10863-011-9345-8

Zinc-induced dimerization of the amyloid-beta metal-binding domain 1-16 is mediated by residues 11-14.
Kozin, S. A.; Mezentsev, Y. V.; Kulikova, A. A.; Indeykina, M. I.; Golovin, A. V.; Ivanov, A. S.; Tsvetkov, P. O.; Makarov, A. A.
Mol Biosyst. 2011 Apr;7(4):1053-5. Epub 2011 Feb 25.
PubMed; doi 10.1039/c0mb00334d

The study of the interaction of (cytosine-5)-DNA methyltransferase SsoII with DNA by acoustic method.
Ryazanova, A. Y.; Kubareva, E. A.; Grman, I.; Lavrova, N. V.; Ryazanova, E. M.; Oretskaya, T. S.; Hianik, T.
Analyst. 2011 Mar 21;136(6):1227-33. Epub 2011 Jan 28.
PubMed; doi 10.1039/c0an00545b

Evolutionary patterns of phosphorylated serines.
Kurmangaliyev, Y. Z.; Goland, A.; Gelfand, M. S.
Biol Direct. 2011 Feb 9;6:8.
PubMed; doi 10.1186/1745-6150-6-8

Oxidation of glyceraldehyde-3-phosphate dehydrogenase decreases sperm motility.
Elkina, Y. L.; Atroshchenko, M. M.; Bragina, E. E.; Muronetz, V. I.; Schmalhausen, E. V.
Biochemistry (Mosc). 2011 Feb;76(2):268-72.
PubMed

Investigation of formate transport through the substrate channel of formate dehydrogenase by steered molecular dynamics simulations.
Nilov, D. K.; Shabalin, I. G.; Popov, V. O.; Svedas, V. K.
Biochemistry (Mosc). 2011 Feb;76(2):172-4.
PubMed

Physiological scenarios of programmed loss of mitochondrial DNA function and death of yeast.
Kochmak, S. A.; Knorre, D. A.; Sokolov, S. S.; Severin, F. F.
Biochemistry (Mosc). 2011 Feb;76(2):167-71.
PubMed

Evolution of prokaryotic genes by shift of stop codons.
Vakhrusheva, A. A.; Kazanov, M. D.; Mironov, A. A.; Bazykin, G. A.
J Mol Evol. 2011 Feb;72(2):138-46. Epub 2010 Nov 17.
PubMed; doi 10.1007/s00239-010-9408-1

De novo sequencing and characterization of floral transcriptome in two species of buckwheat (Fagopyrum).
Logacheva, M. D.; Kasianov, A. S.; Vinogradov, D. V.; Samigullin, T. H.; Gelfand, M. S.; Makeev, V. J.; Penin, A. A.
BMC Genomics. 2011 Jan 13;12:30.
PubMed; doi 10.1186/1471-2164-12-30

Nucleolar localization/retention signal is responsible for transient accumulation of histone H2B in the nucleolus through electrostatic interactions.
Musinova, Y. R.; Lisitsyna, O. M.; Golyshev, S. A.; Tuzhikov, A. I.; Polyakov, V. Y.; Sheval, E. V.
Biochim Biophys Acta. 2011 Jan;1813(1):27-38. Epub 2010 Nov 21.
PubMed; doi 10.1016/j.bbamcr.2010.11.003

Novel modular DNA aptamer for human thrombin with high anticoagulant activity.
Zavyalova, E.; Golovin, A.; Reshetnikov, R.; Mudrik, N.; Panteleyev, D.; Pavlova, G.; Kopylov, A.
Curr Med Chem. 2011;18(22):3343-50.
PubMed

Detecting past positive selection through ongoing negative selection.
Bazykin, G. A.; Kondrashov, A. S.
Genome Biol Evol. 2011;3:1006-13. Epub 2011 Aug 22.
PubMed; doi 10.1093/gbe/evr086

Self-organization of cellular structures induced by the overexpression of nuclear envelope proteins: a correlative light and electron microscopy study.
Volkova, E. G.; Kurchashova, S. Y.; Polyakov, V. Y.; Sheval, E. V.
J Electron Microsc (Tokyo). 2011;60(1):57-71. Epub 2010 Oct 6.
PubMed; doi 10.1093/jmicro/dfq067

[System of innate immunity in plants].
Vakhrusheva, O. A.; Nedospasov, S. A.
Mol Biol (Mosk). 2011 Jan-Feb;45(1):20-9.
PubMed

Alternative translation start sites are conserved in eukaryotic genomes.
Bazykin, G. A.; Kochetov, A. V.
Nucleic Acids Res. 2011 Jan;39(2):567-77. Epub 2010 Sep 22.
PubMed; doi 10.1093/nar/gkq806



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   Лекторий МГУ

25 апреля 2017 г.
Тема: ГРАНИЦЫ И ВОЗМОЖНОСТИ СОВРЕМЕННОЙ ПАЛЕОАНТРОПОЛОГИИ

Александра Петровна БУЖИЛОВА






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весеннего семестра 2016-2017




  Московский Государственный Университет имени М.В.Ломоносова



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